Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formamidase | APR48_18640 | Not Available | Positive | 3950414 - 3951646 | 44508.1 |
| fmdb family transcriptional regulator | APR48_18645 | Not Available | Positive | 3951668 - 3952012 | 12132.3 |
| alpha/beta hydrolase | APR48_18650 | Not Available | Positive | 3952263 - 3952613 | 12030.9 |
| laci family transcriptional regulator | APR48_18660 | Not Available | Negative | 3953807 - 3954784 | 33975.2 |
| dimethylmenaquinone methyltransferase | APR48_18665 | Not Available | Negative | 3954831 - 3955523 | 23790.9 |
| hydroxyacid dehydrogenase | APR48_18670 | Not Available | Negative | 3955520 - 3956524 | 34306.8 |
| lysr family transcriptional regulator | APR48_18675 | Not Available | Positive | 3956616 - 3957551 | 34156.5 |
| aspartate carbamoyltransferase | APR48_18680 | Not Available | Positive | 3957563 - 3958858 | 47206.5 |
| transcriptional regulator | APR48_18685 | Not Available | Positive | 3959002 - 3959835 | 30173.3 |
| hypothetical protein | APR48_18690 | Not Available | Negative | 3959822 - 3960676 | 29576.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
