Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacetylase | APR48_18540 | Not Available | Negative | 3926658 - 3927374 | 26038.8 |
| peptidase m1 | APR48_18545 | Not Available | Positive | 3928297 - 3930519 | 81399.0 |
| hypothetical protein | APR48_18550 | Not Available | Positive | 3930581 - 3930997 | 15265.4 |
| hypothetical protein | APR48_18555 | Not Available | Negative | 3931023 - 3931439 | 14342.3 |
| lipase | APR48_18560 | Not Available | Negative | 3931552 - 3932454 | 32364.6 |
| enamine deaminase rida | APR48_18565 | Not Available | Negative | 3932462 - 3932863 | 13929.7 |
| hypothetical protein | APR48_18570 | Not Available | Negative | 3932863 - 3933771 | 34659.1 |
| lysr family transcriptional regulator | APR48_18575 | Not Available | Positive | 3933880 - 3934785 | 32465.6 |
| hypothetical protein | APR48_18580 | Not Available | Negative | 3934808 - 3935158 | 12939.9 |
| polyketide cyclase | APR48_18585 | Not Available | Negative | 3935183 - 3935629 | 16234.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
