Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_18430 | Not Available | Positive | 3904397 - 3905092 | 23920.7 |
| glutamate racemase | APR48_18435 | Not Available | Positive | 3905092 - 3905814 | 25099.7 |
| benzaldehyde dehydrogenase | APR48_18440 | Not Available | Positive | 3905991 - 3907469 | 51325.2 |
| hypothetical protein | APR48_18445 | Not Available | Negative | 3907500 - 3908483 | 33704.2 |
| lysr family transcriptional regulator | APR48_18450 | Not Available | Positive | 3908710 - 3909663 | 34070.4 |
| hypothetical protein | APR48_18455 | Not Available | Positive | 3909854 - 3910189 | 12096.6 |
| hypothetical protein | APR48_18460 | Not Available | Positive | 3910229 - 3911716 | 51832.7 |
| rna polymerase subunit sigma | APR48_18465 | Not Available | Positive | 3911757 - 3912320 | 21389.0 |
| hypothetical protein | APR48_18470 | Not Available | Positive | 3912317 - 3913141 | 29765.4 |
| hypothetical protein | APR48_18475 | Not Available | Positive | 3913314 - 3913826 | 18604.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
