Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_18330 | Not Available | Negative | 3885958 - 3886716 | 26463.9 |
| glyoxalase | APR48_18335 | Not Available | Negative | 3886733 - 3887185 | 16534.7 |
| dehydrogenase | APR48_18340 | Not Available | Negative | 3887189 - 3887962 | 26445.0 |
| fad-dependent oxidoreductase | APR48_18345 | Not Available | Negative | 3887976 - 3889151 | 42127.3 |
| nadph quinone oxidoreductase | APR48_18350 | Not Available | Negative | 3889174 - 3889956 | 28819.1 |
| arac family transcriptional regulator | APR48_18355 | Not Available | Negative | 3889990 - 3890760 | 29057.8 |
| histidine utilization repressor | APR48_18360 | Not Available | Negative | 3890784 - 3891503 | 26818.5 |
| peptide abc transporter atp-binding protein | APR48_18365 | Not Available | Negative | 3891567 - 3892310 | 27440.4 |
| polar amino acid abc transporter permease | APR48_18370 | Not Available | Negative | 3892326 - 3893465 | 41048.2 |
| abc transporter substrate-binding protein | APR48_18375 | Not Available | Negative | 3893481 - 3894356 | 31409.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
