Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_18180 | Not Available | Positive | 3856182 - 3856364 | 6822.1 |
| hypothetical protein | APR48_18185 | Not Available | Positive | 3856361 - 3856606 | 8959.36 |
| rna polymerase subunit sigma | APR48_18190 | Not Available | Positive | 3856746 - 3857306 | 20881.1 |
| hypothetical protein | APR48_18195 | Not Available | Positive | 3857303 - 3857944 | 22085.9 |
| hypothetical protein | APR48_18200 | Not Available | Positive | 3858142 - 3859089 | 35122.1 |
| hypothetical protein | APR48_18205 | Not Available | Positive | 3859399 - 3861444 | 66825.4 |
| hypothetical protein | APR48_18210 | Not Available | Negative | 3861463 - 3862524 | 36541.5 |
| hypothetical protein | APR48_18215 | Not Available | Negative | 3862583 - 3863584 | 34593.0 |
| arylsulfatase | APR48_18220 | Not Available | Negative | 3863611 - 3865890 | 83758.7 |
| glucose-methanol-choline oxidoreductase | APR48_18225 | Not Available | Negative | 3865917 - 3867536 | 58216.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
