Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron oxidase | APR48_18125 | Not Available | Negative | 3848278 - 3849303 | 37277.5 |
| amino acid abc transporter atp-binding protein | APR48_18130 | Not Available | Negative | 3849300 - 3850043 | 27528.5 |
| amino acid abc transporter permease | APR48_18135 | Not Available | Negative | 3850040 - 3850774 | 26875.8 |
| abc transporter permease | APR48_18140 | Not Available | Negative | 3850794 - 3851489 | 25603.7 |
| pep phosphonomutase | APR48_18150 | Not Available | Negative | 3851897 - 3852730 | 29559.3 |
| arac family transcriptional regulator | APR48_18155 | Not Available | Positive | 3852845 - 3853792 | 34642.6 |
| hypothetical protein | APR48_18160 | Not Available | Negative | 3853814 - 3854188 | 14063.6 |
| lysr family transcriptional regulator | APR48_18165 | Not Available | Positive | 3854292 - 3855233 | 33933.0 |
| aldehyde dehydrogenase | APR48_18170 | Not Available | Positive | 3855483 - 3855953 | 16817.6 |
| hypothetical protein | APR48_18175 | Not Available | Positive | 3855956 - 3856162 | 7324.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
