Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | APR48_18075 | Not Available | Negative | 3838832 - 3839407 | 20906.8 |
| histidine kinase | APR48_18080 | Not Available | Negative | 3839388 - 3840773 | 49916.6 |
| hypothetical protein | APR48_18085 | Not Available | Negative | 3840757 - 3841620 | 30782.5 |
| cytochrome c oxidase subunit iii | APR48_18090 | Not Available | Negative | 3841617 - 3842027 | 15023.5 |
| cytochrome o ubiquinol oxidase subunit iii | APR48_18095 | Not Available | Negative | 3842024 - 3842692 | 24292.8 |
| cytochrome o ubiquinol oxidase subunit i | APR48_18100 | Not Available | Negative | 3842685 - 3844688 | 74692.8 |
| cytochrome o ubiquinol oxidase | APR48_18105 | Not Available | Negative | 3844691 - 3845725 | 38221.4 |
| arabinose abc transporter permease | APR48_18110 | Not Available | Positive | 3845913 - 3847247 | 47345.6 |
| had family hydrolase | APR48_18115 | Not Available | Positive | 3847335 - 3848015 | 23989.9 |
| hypothetical protein | APR48_18120 | Not Available | Positive | 3848012 - 3848335 | 11891.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
