Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR48_18025 | Not Available | Positive | 3825725 - 3827203 | 49539.6 |
| hypothetical protein | APR48_18030 | Not Available | Negative | 3827218 - 3828444 | 44984.5 |
| hypothetical protein | APR48_18035 | Not Available | Negative | 3828455 - 3831409 | 107144.0 |
| hypothetical protein | APR48_18040 | Not Available | Negative | 3831432 - 3832442 | 35986.8 |
| type vi secretion protein impa | APR48_18045 | Not Available | Negative | 3832448 - 3834910 | 89217.2 |
| transcriptional regulator | APR48_18050 | Not Available | Negative | 3835066 - 3835971 | 33244.0 |
| 3-ketoacyl-acp reductase | APR48_18055 | Not Available | Positive | 3836095 - 3836838 | 25874.9 |
| oxidoreductase | APR48_18060 | Not Available | Positive | 3836867 - 3837763 | 31598.0 |
| slyx protein | APR48_18065 | Not Available | Positive | 3837838 - 3838062 | 8432.91 |
| hemolysin d | APR48_18070 | Not Available | Negative | 3838078 - 3838767 | 24596.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
