Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR48_17975 | Not Available | Negative | 3811566 - 3812681 | 38604.3 |
| l-seryl-trna(sec) selenium transferase | APR48_17980 | Not Available | Negative | 3812713 - 3814161 | 50799.1 |
| hypothetical protein | APR48_17985 | Not Available | Negative | 3814161 - 3815177 | 37060.4 |
| formate dehydrogenase | APR48_17990 | Not Available | Negative | 3815227 - 3815850 | 23912.9 |
| formate dehydrogenase | APR48_17995 | Not Available | Negative | 3815847 - 3816812 | 34682.4 |
| formate dehydrogenase | APR48_18000 | Not Available | Negative | 3816816 - 3819257 | 90622.9 |
| sulfate abc transporter substrate-binding protein | APR48_18005 | Not Available | Negative | 3819306 - 3819893 | 21279.4 |
| abc transporter permease | APR48_18010 | Not Available | Positive | 3820475 - 3822991 | 89058.8 |
| hypothetical protein | APR48_18015 | Not Available | Positive | 3823105 - 3824577 | 52666.6 |
| lysr family transcriptional regulator | APR48_18020 | Not Available | Negative | 3824579 - 3825484 | 33470.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
