Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase family accessory protein fdhd | APR48_17925 | Not Available | Positive | 3800824 - 3801696 | 30405.8 |
| trna 2-selenouridine synthase | APR48_17930 | Not Available | Negative | 3801630 - 3802700 | 39451.5 |
| phosphonate abc transporter permease | APR48_17935 | Not Available | Negative | 3802899 - 3803693 | 27718.6 |
| abc transporter permease | APR48_17940 | Not Available | Negative | 3803690 - 3804517 | 28723.0 |
| phosphonate abc transporter | APR48_17945 | Not Available | Negative | 3804514 - 3805326 | 28420.6 |
| phosphonate abc transporter substrate-binding protein | APR48_17950 | Not Available | Negative | 3805349 - 3806206 | 30547.7 |
| selenide, water dikinase | APR48_17955 | Not Available | Positive | 3806296 - 3807348 | 36204.0 |
| selenocysteine-specific elongation factor | APR48_17960 | Not Available | Negative | 3807606 - 3809513 | 68382.2 |
| hypothetical protein | APR48_17965 | Not Available | Negative | 3809524 - 3810729 | 43679.1 |
| hypothetical protein | APR48_17970 | Not Available | Negative | 3810695 - 3811534 | 30650.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
