Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_17820 | Not Available | Positive | 3782079 - 3782258 | 6587.78 |
| hypothetical protein | APR48_17825 | Not Available | Positive | 3782446 - 3783123 | 24010.9 |
| dna topoisomerase | APR48_17830 | Not Available | Negative | 3783069 - 3784373 | 47396.7 |
| purine nucleoside permease | APR48_17835 | Not Available | Positive | 3784508 - 3785557 | 37573.6 |
| hypothetical protein | APR48_17840 | Not Available | Negative | 3785785 - 3786471 | 25558.8 |
| dna polymerase iv | APR48_17845 | Not Available | Negative | 3786476 - 3787666 | 43453.6 |
| lysr family transcriptional regulator | APR48_17855 | Not Available | Positive | 3788271 - 3789218 | 34050.7 |
| mfs transporter | APR48_17860 | Not Available | Positive | 3789359 - 3791050 | 59598.9 |
| hypothetical protein | APR48_17865 | Not Available | Negative | 3791085 - 3791660 | 19417.4 |
| mode family transcriptional regulator | APR48_17870 | Not Available | Positive | 3791830 - 3792177 | 12154.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
