Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | APR48_17770 | Not Available | Negative | 3771096 - 3774005 | 108888.0 |
| hypothetical protein | APR48_17775 | Not Available | Positive | 3774136 - 3774921 | 29484.4 |
| proline dioxygenase | APR48_17780 | Not Available | Positive | 3774962 - 3775807 | 30871.8 |
| alpha/beta hydrolase | APR48_17785 | Not Available | Positive | 3775830 - 3776726 | 32228.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | APR48_17790 | Not Available | Positive | 3776723 - 3777601 | 32642.5 |
| Trna-gly | Not Available | Not Available | Positive | 3777687 - 3777762 | Not Available |
| lysr family transcriptional regulator | APR48_17800 | Not Available | Positive | 3777908 - 3778795 | 32003.3 |
| mandelate racemase | APR48_17805 | Not Available | Positive | 3778897 - 3780051 | 41907.7 |
| abc transporter substrate-binding protein | APR48_17810 | Not Available | Positive | 3780055 - 3781062 | 34769.5 |
| arylmalonate decarboxylase | APR48_17815 | Not Available | Positive | 3781246 - 3781947 | 24731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
