Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_17550 | Not Available | Negative | 3732240 - 3732734 | 18018.3 |
| hypothetical protein | APR48_17555 | Not Available | Negative | 3732941 - 3733399 | 16205.3 |
| hypothetical protein | APR48_17560 | Not Available | Positive | 3733691 - 3733939 | 9264.3 |
| hypothetical protein | APR48_17565 | Not Available | Positive | 3734144 - 3734371 | 8405.04 |
| hypothetical protein | APR48_17570 | Not Available | Positive | 3734371 - 3734685 | 11602.9 |
| Trna-leu | Not Available | Not Available | Positive | 3767972 - 3768056 | Not Available |
| cysteine synthase | APR48_17750 | Not Available | Positive | 3768186 - 3769094 | 32719.2 |
| adp-ribose pyrophosphatase | APR48_17755 | Not Available | Positive | 3769170 - 3769751 | 21515.7 |
| hypothetical protein | APR48_17760 | Not Available | Positive | 3769754 - 3769981 | 8372.13 |
| utp--glucose-1-phosphate uridylyltransferase | APR48_17765 | Not Available | Negative | 3770059 - 3770949 | 32129.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
