Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | APR48_00970 | Not Available | Positive | 208122 - 208661 | 19637.8 |
| hypothetical protein | APR48_00975 | Not Available | Positive | 208658 - 209674 | 35829.7 |
| tonb-dependent receptor | APR48_00980 | Not Available | Positive | 209789 - 212218 | 86917.5 |
| nitrile hydratase subunit alpha | APR48_00985 | Not Available | Positive | 212234 - 212875 | 23516.8 |
| nitrile hydratase subunit beta | APR48_00990 | Not Available | Positive | 212872 - 213531 | 24030.4 |
| nitrile hydratase | APR48_00995 | Not Available | Positive | 213528 - 213899 | 13442.5 |
| hypothetical protein | APR48_01000 | Not Available | Negative | 213907 - 214944 | 39191.2 |
| hydroxyacid dehydrogenase | APR48_01005 | Not Available | Negative | 214970 - 216406 | 51127.1 |
| hypothetical protein | APR48_01010 | Not Available | Negative | 216403 - 216802 | 14440.1 |
| methyltransferase type 11 | APR48_01015 | Not Available | Positive | 216877 - 217482 | 23086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
