Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_17445 | Not Available | Negative | 3716975 - 3717301 | 11438.5 |
| glutamine--trna ligase | APR48_17450 | Not Available | Positive | 3717439 - 3719253 | 67812.8 |
| peptidase m23 | APR48_17455 | Not Available | Positive | 3719347 - 3720255 | 31950.6 |
| hypothetical protein | APR48_17460 | Not Available | Positive | 3720405 - 3722153 | 65734.3 |
| restriction endonuclease | APR48_17465 | Not Available | Positive | 3722171 - 3723076 | 32737.3 |
| succinylglutamate desuccinylase | APR48_17470 | Not Available | Negative | 3723158 - 3724085 | 33765.2 |
| hypothetical protein | APR48_17480 | Not Available | Negative | 3724553 - 3724822 | 10469.2 |
| hnh endonuclease | APR48_17485 | Not Available | Negative | 3724812 - 3725234 | 16265.5 |
| hypothetical protein | APR48_17490 | Not Available | Negative | 3725215 - 3725676 | 17028.0 |
| hypothetical protein | APR48_17495 | Not Available | Negative | 3725673 - 3726143 | 17191.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
