Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_17395 | Not Available | Positive | 3701904 - 3702269 | 13014.1 |
| rnd transporter | APR48_17400 | Not Available | Negative | 3702398 - 3703858 | 51011.9 |
| nodulation protein | APR48_17405 | Not Available | Negative | 3703903 - 3707217 | 117323.0 |
| multidrug transporter | APR48_17410 | Not Available | Negative | 3707903 - 3711031 | 110577.0 |
| secretion protein hlyd | APR48_17415 | Not Available | Negative | 3711101 - 3712798 | 58175.8 |
| hypothetical protein | APR48_17420 | Not Available | Positive | 3713125 - 3713646 | 18224.1 |
| fatty acid hydroxylase | APR48_17425 | Not Available | Positive | 3713692 - 3714639 | 36106.1 |
| hypothetical protein | APR48_17430 | Not Available | Positive | 3714636 - 3714929 | 10827.3 |
| histidine kinase | APR48_17435 | Not Available | Positive | 3714926 - 3716050 | 40487.2 |
| lytr family transcriptional regulator | APR48_17440 | Not Available | Positive | 3716047 - 3716892 | 30580.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
