Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal | APR48_17345 | Not Available | Positive | 3691710 - 3692678 | 33576.8 |
| molybdenum cofactor biosysynthesis protein | APR48_17350 | Not Available | Negative | 3692680 - 3693195 | 18111.2 |
| luxr family transcriptional regulator | APR48_17355 | Not Available | Positive | 3693295 - 3694032 | 26036.7 |
| histidine kinase | APR48_17360 | Not Available | Positive | 3694047 - 3695864 | 66315.4 |
| udp pyrophosphate phosphatase | APR48_17365 | Not Available | Negative | 3695882 - 3696709 | 30025.5 |
| hypothetical protein | APR48_17370 | Not Available | Positive | 3696915 - 3697823 | 33193.2 |
| arylsulfatase | APR48_17375 | Not Available | Negative | 3697815 - 3698471 | 22740.4 |
| abc transporter substrate-binding protein | APR48_17380 | Not Available | Negative | 3698488 - 3699387 | 32609.4 |
| hypothetical protein | APR48_17385 | Not Available | Negative | 3699443 - 3700777 | 47258.7 |
| dna-binding protein | APR48_17390 | Not Available | Positive | 3700951 - 3701817 | 30929.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
