Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | APR48_17295 | Not Available | Positive | 3680564 - 3681139 | 20760.7 |
| fad-binding protein | APR48_17300 | Not Available | Positive | 3681153 - 3681980 | 30355.1 |
| disulfide bond formation protein dsba | APR48_17305 | Not Available | Negative | 3682003 - 3683532 | 54564.9 |
| hypothetical protein | APR48_17310 | Not Available | Negative | 3683529 - 3684005 | 17057.8 |
| magnesium transporter | APR48_17315 | Not Available | Negative | 3684057 - 3685034 | 36308.8 |
| dna mismatch repair protein muts | APR48_17320 | Not Available | Positive | 3685576 - 3688173 | 93543.4 |
| peptidase | APR48_17325 | Not Available | Positive | 3688202 - 3689041 | 31038.1 |
| alpha/beta hydrolase | APR48_17330 | Not Available | Positive | 3689047 - 3689850 | 29795.9 |
| arac family transcriptional regulator | APR48_17335 | Not Available | Negative | 3689858 - 3690853 | 36033.2 |
| arac family transcriptional regulator | APR48_17340 | Not Available | Positive | 3691010 - 3691693 | 24210.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
