Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_17240 | Not Available | Positive | 3669193 - 3669555 | 12925.5 |
| hypothetical protein | APR48_17250 | Not Available | Positive | 3671239 - 3671913 | 24952.1 |
| hypothetical protein | APR48_17255 | Not Available | Positive | 3672077 - 3672787 | 25089.8 |
| hypothetical protein | APR48_17260 | Not Available | Positive | 3672784 - 3673644 | 31181.6 |
| tonb-dependent receptor | APR48_17265 | Not Available | Negative | 3673641 - 3675842 | 79464.7 |
| abc transporter permease | APR48_17270 | Not Available | Negative | 3675887 - 3677377 | 54188.4 |
| abc transporter permease | APR48_17275 | Not Available | Negative | 3677394 - 3678794 | 51384.3 |
| abc transporter atp-binding protein | APR48_17280 | Not Available | Negative | 3678797 - 3679504 | 25450.8 |
| 50s ribosomal protein l36 | APR48_17285 | Not Available | Negative | 3679672 - 3679821 | 5715.07 |
| fur family transcriptional regulator | APR48_17290 | Not Available | Negative | 3679921 - 3680382 | 16546.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
