Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_17190 | Not Available | Positive | 3657508 - 3659082 | 55711.4 |
| cysteine hydrolase | APR48_17195 | Not Available | Positive | 3659096 - 3659764 | 23696.5 |
| feruloyl esterase | APR48_17200 | Not Available | Positive | 3659803 - 3661408 | 55864.2 |
| hypothetical protein | APR48_17205 | Not Available | Negative | 3661475 - 3662398 | 33784.6 |
| hypothetical protein | APR48_17210 | Not Available | Negative | 3662687 - 3664285 | 56977.1 |
| 3-methyladenine dna glycosylase | APR48_17215 | Not Available | Negative | 3664681 - 3665331 | 24082.7 |
| hypothetical protein | APR48_17220 | Not Available | Negative | 3665387 - 3666523 | 40159.1 |
| alanyl-trna editing protein | APR48_17225 | Not Available | Negative | 3666531 - 3667256 | 26388.5 |
| hypothetical protein | APR48_17230 | Not Available | Negative | 3667281 - 3668177 | 31325.6 |
| arac family transcriptional regulator | APR48_17235 | Not Available | Negative | 3668267 - 3669106 | 31078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
