Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine abc transporter permease | APR48_17140 | Not Available | Positive | 3648576 - 3649403 | 29410.5 |
| nitrate abc transporter atp-binding protein | APR48_17145 | Not Available | Positive | 3649400 - 3650233 | 31543.4 |
| hypothetical protein | APR48_17150 | Not Available | Positive | 3650248 - 3650463 | 7419.84 |
| amidase | APR48_17155 | Not Available | Positive | 3650460 - 3651887 | 49347.1 |
| hypothetical protein | APR48_17160 | Not Available | Positive | 3651910 - 3652296 | 14404.9 |
| abc transporter substrate-binding protein | APR48_17165 | Not Available | Positive | 3652342 - 3653460 | 39813.0 |
| abc transporter permease | APR48_17170 | Not Available | Positive | 3653578 - 3654654 | 36660.5 |
| abc transporter permease | APR48_17175 | Not Available | Positive | 3654651 - 3655574 | 31241.6 |
| formamidase | APR48_17180 | Not Available | Positive | 3655618 - 3656619 | 36191.3 |
| cysteine hydrolase | APR48_17185 | Not Available | Positive | 3656616 - 3657326 | 25481.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
