Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polymerase | APR48_17090 | Not Available | Negative | 3636029 - 3637300 | 46231.7 |
| histidine kinase | APR48_17095 | Not Available | Negative | 3637381 - 3638565 | 42561.5 |
| two-component system response regulator | APR48_17100 | Not Available | Negative | 3638651 - 3639373 | 26653.4 |
| halogenase | APR48_17105 | Not Available | Negative | 3639440 - 3641089 | 62200.8 |
| hypothetical protein | APR48_17110 | Not Available | Negative | 3641103 - 3641924 | 27661.8 |
| 3-oxoacyl-acp synthase | APR48_17115 | Not Available | Negative | 3641921 - 3643114 | 41212.8 |
| ampg family muropeptide mfs transporter | APR48_17120 | Not Available | Negative | 3643254 - 3644633 | 48775.2 |
| peptidase m48 | APR48_17125 | Not Available | Positive | 3644723 - 3645577 | 30170.3 |
| allophanate hydrolase | APR48_17130 | Not Available | Positive | 3645813 - 3647531 | 59776.3 |
| abc transporter substrate-binding protein | APR48_17135 | Not Available | Positive | 3647570 - 3648571 | 35352.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
