Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | APR48_00920 | Not Available | Negative | 199289 - 200260 | 34326.6 |
| abc transporter substrate-binding protein | APR48_00925 | Not Available | Negative | 200292 - 201263 | 33918.2 |
| transposase | APR48_00930 | Not Available | Negative | 201286 - 202344 | 38687.3 |
| taurine dioxygenase | APR48_00935 | Not Available | Negative | 202390 - 203238 | 31859.0 |
| arac family transcriptional regulator | APR48_00940 | Not Available | Positive | 203396 - 204388 | 36541.4 |
| hypothetical protein | APR48_00945 | Not Available | Negative | 204375 - 204614 | 8757.84 |
| hypothetical protein | APR48_00950 | Not Available | Negative | 204801 - 205259 | 16966.2 |
| hypothetical protein | APR48_00955 | Not Available | Negative | 205476 - 206579 | 41094.1 |
| dihydrofolate reductase | APR48_00960 | Not Available | Negative | 206576 - 207085 | 18572.1 |
| thymidylate synthase | APR48_00965 | Not Available | Negative | 207156 - 208025 | 33418.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
