Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | APR48_16990 | Not Available | Negative | 3615232 - 3615663 | 16247.7 |
| abc transporter substrate-binding protein | APR48_16995 | Not Available | Negative | 3615753 - 3616739 | 34020.1 |
| monooxygenase | APR48_17000 | Not Available | Negative | 3616736 - 3618436 | 62098.0 |
| lysr family transcriptional regulator | APR48_17005 | Not Available | Positive | 3618484 - 3619437 | 33661.9 |
| lysr family transcriptional regulator | APR48_17010 | Not Available | Negative | 3619442 - 3620359 | 33247.4 |
| aldolase | APR48_17015 | Not Available | Positive | 3620472 - 3621245 | 28602.9 |
| hypothetical protein | APR48_17020 | Not Available | Positive | 3621283 - 3622284 | 34572.2 |
| hypothetical protein | APR48_17025 | Not Available | Positive | 3622281 - 3623234 | 33729.1 |
| dna repair protein rada | APR48_17030 | Not Available | Positive | 3623287 - 3624678 | 48497.5 |
| glycerate kinase | APR48_17035 | Not Available | Positive | 3625144 - 3625575 | 15556.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
