Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR48_16890 | Not Available | Positive | 3597090 - 3598298 | 43222.2 |
| hypothetical protein | APR48_16895 | Not Available | Positive | 3598334 - 3599329 | 34409.7 |
| transcriptional regulator | APR48_16900 | Not Available | Negative | 3599367 - 3600251 | 32314.0 |
| multidrug dmt transporter permease | APR48_16905 | Not Available | Positive | 3600400 - 3601344 | 32349.3 |
| hypothetical protein | APR48_16910 | Not Available | Positive | 3601477 - 3601941 | 16913.3 |
| 2-dehydropantoate 2-reductase | APR48_16915 | Not Available | Negative | 3601970 - 3602947 | 34146.8 |
| aldolase | APR48_16920 | Not Available | Negative | 3602964 - 3603764 | 28929.6 |
| twin-arginine translocation pathway signal protein | APR48_16925 | Not Available | Negative | 3603783 - 3604772 | 34245.3 |
| dihydroxy-acid dehydratase | APR48_16930 | Not Available | Negative | 3604807 - 3606543 | 60697.0 |
| polyketide cyclase | APR48_16935 | Not Available | Negative | 3606582 - 3607046 | 16949.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
