Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa transferase | APR48_16835 | Not Available | Negative | 3583639 - 3584835 | 42772.5 |
| propionate catabolism operon regulatory protein prpr | APR48_16840 | Not Available | Positive | 3584996 - 3586954 | 72939.0 |
| virulence factor | APR48_16845 | Not Available | Positive | 3587042 - 3587374 | 12048.6 |
| cobalt abc transporter substrate-binding protein | APR48_16850 | Not Available | Negative | 3587421 - 3588161 | 25742.5 |
| tonb-dependent receptor | APR48_16855 | Not Available | Negative | 3588185 - 3590302 | 74862.2 |
| mfs transporter | APR48_16865 | Not Available | Negative | 3591026 - 3592330 | 46684.2 |
| alanine racemase | APR48_16870 | Not Available | Positive | 3592508 - 3593617 | 40578.5 |
| hypothetical protein | APR48_16875 | Not Available | Positive | 3593614 - 3594351 | 26084.1 |
| lysr family transcriptional regulator | APR48_16880 | Not Available | Positive | 3594367 - 3595359 | 35584.2 |
| amp-dependent synthetase | APR48_16885 | Not Available | Positive | 3595465 - 3597075 | 57589.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
