Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase | APR48_16780 | Not Available | Negative | 3574694 - 3575254 | 20037.2 |
| carboxymuconolactone decarboxylase | APR48_16785 | Not Available | Negative | 3575296 - 3575841 | 18743.3 |
| arac family transcriptional regulator | APR48_16790 | Not Available | Positive | 3575942 - 3576811 | 31974.0 |
| tetr family transcriptional regulator | APR48_16800 | Not Available | Positive | 3577549 - 3578172 | 23185.3 |
| hypothetical protein | APR48_16805 | Not Available | Negative | 3578156 - 3578659 | 17888.6 |
| laci family transcriptional regulator | APR48_16810 | Not Available | Negative | 3578727 - 3579713 | 34125.4 |
| esterase | APR48_16815 | Not Available | Negative | 3579758 - 3580792 | 38305.5 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR48_16820 | Not Available | Negative | 3580828 - 3581694 | 31640.0 |
| hypothetical protein | APR48_16825 | Not Available | Negative | 3581697 - 3582689 | 34562.9 |
| hydroxymethylglutaryl-coa lyase | APR48_16830 | Not Available | Negative | 3582686 - 3583636 | 33290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
