Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_16625 | Not Available | Negative | 3543894 - 3545366 | 52976.2 |
| polyketide cyclase | APR48_16630 | Not Available | Negative | 3545366 - 3545806 | 16495.3 |
| hypothetical protein | APR48_16635 | Not Available | Negative | 3545810 - 3547498 | 61887.7 |
| hypothetical protein | APR48_16640 | Not Available | Negative | 3547516 - 3548346 | 29158.4 |
| abc transporter permease | APR48_16645 | Not Available | Negative | 3548374 - 3550626 | 79233.8 |
| abc transporter atp-binding protein | APR48_16650 | Not Available | Negative | 3550626 - 3551372 | 26771.2 |
| abc transporter substrate-binding protein | APR48_16655 | Not Available | Negative | 3551519 - 3552730 | 42889.1 |
| abc transporter atp-binding protein | APR48_16660 | Not Available | Negative | 3552798 - 3553817 | 36476.6 |
| abc transporter atp-binding protein | APR48_16665 | Not Available | Negative | 3553946 - 3554896 | 33496.1 |
| cytosine deaminase | APR48_16670 | Not Available | Negative | 3554893 - 3556188 | 46925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
