Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_16575 | Not Available | Negative | 3535883 - 3536077 | 7098.56 |
| 3-phenylpropionate dioxygenase | APR48_16580 | Not Available | Negative | 3536087 - 3536677 | 23396.9 |
| short-chain dehydrogenase | APR48_16585 | Not Available | Negative | 3536704 - 3537513 | 26902.3 |
| hydrogenase | APR48_16590 | Not Available | Negative | 3537534 - 3538898 | 52081.1 |
| electron transfer flavoprotein | APR48_16595 | Not Available | Negative | 3538952 - 3539959 | 35070.8 |
| hypothetical protein | APR48_16600 | Not Available | Negative | 3539983 - 3540972 | 33828.9 |
| transcriptional regulator | APR48_16605 | Not Available | Positive | 3541148 - 3541912 | 27814.7 |
| xre family transcriptional regulator | APR48_16610 | Not Available | Positive | 3541969 - 3542256 | 10896.1 |
| phosphatidylinositol kinase | APR48_16615 | Not Available | Positive | 3542246 - 3543466 | 44946.7 |
| hypothetical protein | APR48_16620 | Not Available | Negative | 3543485 - 3543850 | 13460.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
