Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonate-semialdehyde dehydrogenase | APR48_16525 | Not Available | Negative | 3524169 - 3525680 | 53961.0 |
| lysr family transcriptional regulator | APR48_16530 | Not Available | Positive | 3525807 - 3526751 | 34416.3 |
| metallophosphatase | APR48_16535 | Not Available | Positive | 3526810 - 3527943 | 40737.2 |
| hypothetical protein | APR48_16540 | Not Available | Positive | 3527946 - 3530600 | 96721.5 |
| hypothetical protein | APR48_16545 | Not Available | Negative | 3530622 - 3530834 | 7183.85 |
| alkylhydroperoxidase | APR48_16550 | Not Available | Negative | 3530977 - 3531441 | 16608.9 |
| dna-binding protein | APR48_16555 | Not Available | Negative | 3531562 - 3532983 | 51924.0 |
| hypothetical protein | APR48_16560 | Not Available | Negative | 3533000 - 3533782 | 28196.6 |
| hypothetical protein | APR48_16565 | Not Available | Negative | 3533833 - 3534801 | 34106.3 |
| hypothetical protein | APR48_16570 | Not Available | Negative | 3534819 - 3535802 | 32854.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
