Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | APR48_00870 | Not Available | Positive | 188504 - 190144 | 59907.2 |
| hypothetical protein | APR48_00875 | Not Available | Negative | 190339 - 191607 | 45386.2 |
| aminoglycoside phosphotransferase | APR48_00880 | Not Available | Negative | 191643 - 192428 | 28994.4 |
| hypothetical protein | APR48_00885 | Not Available | Negative | 192525 - 192791 | 9421.01 |
| hypothetical protein | APR48_00890 | Not Available | Positive | 193015 - 193284 | 10288.1 |
| hypothetical protein | APR48_00895 | Not Available | Positive | 193401 - 193628 | 7927.0 |
| hypothetical protein | APR48_00900 | Not Available | Positive | 193713 - 194720 | 35246.9 |
| hypothetical protein | APR48_00905 | Not Available | Positive | 194942 - 195472 | 18648.2 |
| atp-dependent dna ligase | APR48_00910 | Not Available | Positive | 195486 - 198032 | 94446.7 |
| porin | APR48_00915 | Not Available | Negative | 198051 - 199277 | 42151.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
