Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-oxalocrotonate tautomerase | APR48_16475 | Not Available | Negative | 3515747 - 3516124 | 13802.3 |
| lysr family transcriptional regulator | APR48_16480 | Not Available | Positive | 3516213 - 3517070 | 30728.7 |
| hypothetical protein | APR48_16485 | Not Available | Negative | 3517072 - 3517713 | 22026.1 |
| tonb-dependent receptor | APR48_16490 | Not Available | Positive | 3517714 - 3520107 | 87077.7 |
| hypothetical protein | APR48_16495 | Not Available | Positive | 3520107 - 3520385 | 9659.07 |
| hypothetical protein | APR48_16500 | Not Available | Positive | 3520372 - 3520668 | 10284.8 |
| peptidase | APR48_16505 | Not Available | Positive | 3520672 - 3522258 | 56554.8 |
| hypothetical protein | APR48_16510 | Not Available | Positive | 3522439 - 3522894 | 16953.1 |
| hypothetical protein | APR48_16515 | Not Available | Positive | 3523002 - 3523322 | 11902.5 |
| cell filamentation protein fic | APR48_16520 | Not Available | Positive | 3523306 - 3524040 | 27577.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
