Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | APR48_16420 | Not Available | Positive | 3502403 - 3504133 | 61977.8 |
| indolepyruvate ferredoxin oxidoreductase | APR48_16425 | Not Available | Positive | 3504160 - 3507651 | 125622.0 |
| hypothetical protein | APR48_16430 | Not Available | Positive | 3507928 - 3508500 | 19864.8 |
| hypothetical protein | APR48_16435 | Not Available | Negative | 3508519 - 3509508 | 35140.7 |
| iclr family transcriptional regulator | APR48_16445 | Not Available | Positive | 3511277 - 3512080 | 29510.4 |
| arac family transcriptional regulator | APR48_16450 | Not Available | Negative | 3512106 - 3512987 | 31970.1 |
| 3-oxoacyl-acp reductase | APR48_16455 | Not Available | Positive | 3513135 - 3513887 | 25848.9 |
| extradiol dioxygenase | APR48_16460 | Not Available | Positive | 3513901 - 3514305 | 14490.9 |
| hypothetical protein | APR48_16465 | Not Available | Negative | 3514311 - 3515243 | 33198.7 |
| merr family transcriptional regulator | APR48_16470 | Not Available | Negative | 3515328 - 3515711 | 14247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
