Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_16370 | Not Available | Negative | 3491655 - 3492566 | 33044.4 |
| hypothetical protein | APR48_16375 | Not Available | Positive | 3492719 - 3493696 | 34212.7 |
| hypothetical protein | APR48_16380 | Not Available | Positive | 3493737 - 3494915 | 41799.8 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase | APR48_16385 | Not Available | Positive | 3494941 - 3495798 | 29825.7 |
| nipsnap family containing protein | APR48_16390 | Not Available | Positive | 3495795 - 3496112 | 12177.6 |
| hypothetical protein | APR48_16395 | Not Available | Positive | 3496174 - 3497136 | 33932.8 |
| peptidase s15 | APR48_16400 | Not Available | Positive | 3497233 - 3498948 | 63528.2 |
| arac family transcriptional regulator | APR48_16405 | Not Available | Positive | 3498980 - 3499786 | 29710.8 |
| acyl-coa dehydrogenase | APR48_16410 | Not Available | Positive | 3499869 - 3501038 | 42311.9 |
| hypothetical protein | APR48_16415 | Not Available | Positive | 3501050 - 3502381 | 45573.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
