Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_16255 | Not Available | Positive | 3468150 - 3470408 | 80885.7 |
| methionine abc transporter substrate-binding protein | APR48_16260 | Not Available | Positive | 3470567 - 3471373 | 29566.6 |
| hypothetical protein | APR48_16265 | Not Available | Negative | 3471383 - 3472186 | 28768.2 |
| peptide abc transporter permease | APR48_16275 | Not Available | Negative | 3473283 - 3474155 | 30376.7 |
| peptide abc transporter permease | APR48_16280 | Not Available | Negative | 3474152 - 3475171 | 36016.7 |
| abc transporter substrate-binding protein | APR48_16285 | Not Available | Negative | 3475168 - 3476778 | 59633.5 |
| sfnb family sulfur acquisition oxidoreductase | APR48_16290 | Not Available | Negative | 3476809 - 3478017 | 43450.2 |
| n5,n10-methylene tetrahydromethanopterin reductase | APR48_16295 | Not Available | Negative | 3478014 - 3479396 | 49999.4 |
| taurine dioxygenase | APR48_16300 | Not Available | Negative | 3479472 - 3480383 | 33380.6 |
| hypothetical protein | APR48_16305 | Not Available | Positive | 3480600 - 3480932 | 11831.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
