Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | APR48_16205 | Not Available | Positive | 3456524 - 3457147 | 22957.4 |
| lysr family transcriptional regulator | APR48_16210 | Not Available | Negative | 3457148 - 3458032 | 32890.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | APR48_16215 | Not Available | Positive | 3458140 - 3460431 | 85089.7 |
| nitrilotriacetate monooxygenase | APR48_16220 | Not Available | Negative | 3460454 - 3461806 | 49874.7 |
| luciferase | APR48_16225 | Not Available | Positive | 3462012 - 3463109 | 38169.4 |
| hypothetical protein | APR48_16230 | Not Available | Positive | 3463106 - 3463738 | 22147.4 |
| alkylhydroperoxidase | APR48_16235 | Not Available | Positive | 3463762 - 3464346 | 21454.1 |
| transcriptional regulator | APR48_16240 | Not Available | Negative | 3464350 - 3465291 | 34125.1 |
| monooxygenase | APR48_16245 | Not Available | Positive | 3465551 - 3467023 | 53098.0 |
| rifampin adp-ribosyl transferase | APR48_16250 | Not Available | Negative | 3467048 - 3467464 | 15212.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
