Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nodulation factor abc transporter atp-binding protein nodi | APR48_16150 | Not Available | Positive | 3440342 - 3441316 | 35385.8 |
| nodulation protein nodj | APR48_16155 | Not Available | Positive | 3441370 - 3442212 | 30745.2 |
| cro/cl family transcriptional regulator | APR48_16165 | Not Available | Negative | 3446005 - 3447444 | 53187.9 |
| thioesterase | APR48_16170 | Not Available | Positive | 3447568 - 3447963 | 13749.8 |
| 2-methylcitrate synthase | APR48_16175 | Not Available | Positive | 3447960 - 3449126 | 42549.0 |
| abc transporter substrate-binding protein | APR48_16180 | Not Available | Positive | 3449248 - 3450231 | 34186.3 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | APR48_16185 | Not Available | Positive | 3450288 - 3452912 | 95623.2 |
| 3-methylitaconate isomerase | APR48_16190 | Not Available | Positive | 3452925 - 3454118 | 41314.6 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR48_16195 | Not Available | Positive | 3454136 - 3454996 | 30947.0 |
| gntr family transcriptional regulator | APR48_16200 | Not Available | Negative | 3454987 - 3456441 | 52192.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
