Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase | APR48_16100 | Not Available | Positive | 3430652 - 3431200 | 18257.4 |
| amp nucleosidase | APR48_16105 | Not Available | Positive | 3431246 - 3432763 | 56554.7 |
| twin-arginine translocation pathway signal protein | APR48_16110 | Not Available | Positive | 3432977 - 3433903 | 32084.9 |
| arsr family transcriptional regulator | APR48_16115 | Not Available | Negative | 3433915 - 3434616 | 24857.0 |
| cytochrome | APR48_16120 | Not Available | Positive | 3434699 - 3435877 | 41822.5 |
| pyridoxamine 5'-phosphate oxidase | APR48_16125 | Not Available | Negative | 3435894 - 3436874 | 34895.7 |
| glutathione s-transferase | APR48_16130 | Not Available | Negative | 3436886 - 3437533 | 23602.3 |
| lysr family transcriptional regulator | APR48_16135 | Not Available | Positive | 3437654 - 3438544 | 32572.5 |
| hypothetical protein | APR48_16140 | Not Available | Negative | 3438554 - 3439228 | 24606.7 |
| hypothetical protein | APR48_16145 | Not Available | Negative | 3439225 - 3440100 | 30565.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
