Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-transferase | APR48_16045 | Not Available | Negative | 3417718 - 3418923 | 42628.3 |
| gntr family transcriptional regulator | APR48_16055 | Not Available | Negative | 3420436 - 3421329 | 32195.2 |
| pyruvate phosphate dikinase | APR48_16060 | Not Available | Negative | 3421346 - 3423382 | 73171.8 |
| glutathione reductase | APR48_16065 | Not Available | Positive | 3423536 - 3424897 | 48328.8 |
| 2-dehydropantoate 2-reductase | APR48_16070 | Not Available | Negative | 3424906 - 3425808 | 31247.7 |
| lysr family transcriptional regulator | APR48_16075 | Not Available | Negative | 3425864 - 3426778 | 32679.4 |
| abc transporter permease | APR48_16080 | Not Available | Positive | 3426963 - 3427739 | 27249.8 |
| abc transporter atp-binding protein | APR48_16085 | Not Available | Positive | 3427736 - 3428764 | 36770.5 |
| iron abc transporter substrate-binding protein | APR48_16090 | Not Available | Positive | 3428829 - 3429869 | 37491.0 |
| abc transporter permease | APR48_16095 | Not Available | Positive | 3429880 - 3430701 | 28420.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
