Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii pantothenate kinase | APR48_15995 | Not Available | Negative | 3408665 - 3409447 | 27492.3 |
| peptidase m23 | APR48_16000 | Not Available | Positive | 3409583 - 3410047 | 16077.0 |
| dna polymerase subunit beta | APR48_16005 | Not Available | Positive | 3410154 - 3410783 | 22540.2 |
| dna-binding protein | APR48_16010 | Not Available | Positive | 3410731 - 3411177 | 15956.1 |
| sulfurtransferase | APR48_16015 | Not Available | Negative | 3411182 - 3411592 | 14636.3 |
| c4-dicarboxylate abc transporter | APR48_16020 | Not Available | Positive | 3411819 - 3412934 | 40736.8 |
| hypothetical protein | APR48_16025 | Not Available | Positive | 3413060 - 3413689 | 23681.1 |
| c4-dicarboxylate abc transporter | APR48_16030 | Not Available | Positive | 3413686 - 3415632 | 68650.3 |
| abc transporter substrate-binding protein | APR48_16035 | Not Available | Negative | 3415700 - 3416668 | 33577.8 |
| hydroxymethylglutaryl-coa lyase | APR48_16040 | Not Available | Negative | 3416714 - 3417721 | 35826.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
