Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | APR48_00820 | Not Available | Negative | 176371 - 179091 | 98778.4 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | APR48_00825 | Not Available | Positive | 179227 - 180009 | 26909.4 |
| transcriptional regulator | APR48_00830 | Not Available | Negative | 180022 - 180537 | 19169.7 |
| 2-hydroxycyclohexanecarboxyl-coa dehydrogenase | APR48_00835 | Not Available | Positive | 180672 - 181439 | 26484.8 |
| 2-ketocyclohexanecarboxyl-coa hydrolase | APR48_00840 | Not Available | Positive | 181474 - 182256 | 28534.1 |
| cyclohexanecarboxyl-coa dehydrogenase | APR48_00845 | Not Available | Positive | 182279 - 183430 | 41555.8 |
| cyclohexanecarboxylate-coa ligase | APR48_00850 | Not Available | Positive | 183478 - 185142 | 59837.4 |
| abc transporter substrate-binding protein | APR48_00855 | Not Available | Positive | 185198 - 186190 | 34562.9 |
| enoyl-coa hydratase | APR48_00860 | Not Available | Positive | 186207 - 186986 | 27904.9 |
| acetyl-coa acetyltransferase | APR48_00865 | Not Available | Positive | 187076 - 188254 | 40971.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
