Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_15895 | Not Available | Positive | 3385575 - 3386222 | 23712.2 |
| coa-transferase | APR48_15900 | Not Available | Negative | 3386376 - 3387629 | 43329.1 |
| arac family transcriptional regulator | APR48_15905 | Not Available | Positive | 3387952 - 3388851 | 33343.3 |
| laci family transcriptional regulator | APR48_15910 | Not Available | Positive | 3388964 - 3389884 | 31838.6 |
| ribonucleotide-diphosphate reductase subunit alpha | APR48_15915 | Not Available | Positive | 3389913 - 3391430 | 54695.6 |
| ribose abc transporter permease | APR48_15920 | Not Available | Positive | 3391427 - 3392407 | 33087.6 |
| iditol 2-dehydrogenase | APR48_15925 | Not Available | Positive | 3392456 - 3393589 | 40456.1 |
| hypothetical protein | APR48_15930 | Not Available | Positive | 3393586 - 3395112 | 54591.7 |
| short-chain dehydrogenase | APR48_15935 | Not Available | Positive | 3395273 - 3396010 | 24935.1 |
| polyhydroxyalkanoic acid synthase | APR48_15940 | Not Available | Negative | 3396023 - 3396337 | 11605.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
