Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_15845 | Not Available | Negative | 3370085 - 3374800 | 166297.0 |
| aldolase | APR48_15850 | Not Available | Negative | 3374975 - 3375838 | 31275.9 |
| aldo/keto reductase | APR48_15855 | Not Available | Negative | 3375890 - 3376870 | 34663.4 |
| abc transporter permease | APR48_15860 | Not Available | Negative | 3376867 - 3377823 | 33382.5 |
| d-ribose transporter atp-binding protein | APR48_15865 | Not Available | Negative | 3377904 - 3379406 | 53306.9 |
| transporter | APR48_15870 | Not Available | Negative | 3379424 - 3380476 | 37524.1 |
| carbohydrate kinase | APR48_15875 | Not Available | Positive | 3380654 - 3382180 | 50972.1 |
| fad-dependent oxidoreductase | APR48_15880 | Not Available | Positive | 3382177 - 3383934 | 63211.3 |
| gntr family transcriptional regulator | APR48_15885 | Not Available | Positive | 3383931 - 3384686 | 28181.1 |
| acyl-coa-binding protein | APR48_15890 | Not Available | Positive | 3384776 - 3385033 | 9504.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
