Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | APR48_15745 | Not Available | Negative | 3350072 - 3350722 | 23143.3 |
| hypothetical protein | APR48_15750 | Not Available | Positive | 3350909 - 3351616 | 25113.8 |
| cyclic pyranopterin phosphate synthase moaa | APR48_15755 | Not Available | Positive | 3351730 - 3352875 | 41591.0 |
| molybdenum cofactor biosynthesis protein moaa | APR48_15760 | Not Available | Positive | 3352884 - 3354197 | 45926.6 |
| abc transporter substrate-binding protein | APR48_15765 | Not Available | Negative | 3354199 - 3355167 | 33469.2 |
| hypothetical protein | APR48_15770 | Not Available | Negative | 3355220 - 3356473 | 46284.9 |
| carnitine dehydratase | APR48_15775 | Not Available | Negative | 3356499 - 3357710 | 42800.9 |
| lysr family transcriptional regulator | APR48_15780 | Not Available | Positive | 3357807 - 3358790 | 35214.0 |
| acetamidase | APR48_15785 | Not Available | Negative | 3358797 - 3359786 | 36206.4 |
| abc transporter atp-binding protein | APR48_15790 | Not Available | Negative | 3359812 - 3360507 | 25033.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
