Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_15695 | Not Available | Negative | 3340081 - 3340341 | 9064.9 |
| hypothetical protein | APR48_15700 | Not Available | Negative | 3340328 - 3340699 | 13580.9 |
| hypothetical protein | APR48_15705 | Not Available | Negative | 3340717 - 3341652 | 34786.2 |
| 3-oxoacyl-acp synthase | APR48_15710 | Not Available | Negative | 3341639 - 3343564 | 70770.9 |
| fatty acid desaturase | APR48_15715 | Not Available | Negative | 3343568 - 3344491 | 36135.9 |
| desaturase | APR48_15720 | Not Available | Negative | 3344475 - 3345269 | 30203.6 |
| phospholipase | APR48_15725 | Not Available | Negative | 3345279 - 3346862 | 57892.3 |
| peroxiredoxin | APR48_15730 | Not Available | Positive | 3347029 - 3347592 | 19719.4 |
| aldehyde dehydrogenase | APR48_15735 | Not Available | Positive | 3347635 - 3349068 | 51115.9 |
| divalent cation transporter | APR48_15740 | Not Available | Negative | 3349143 - 3350033 | 30377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
