Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_15645 | Not Available | Positive | 3328689 - 3329357 | 24791.4 |
| inorganic pyrophosphatase | APR48_15650 | Not Available | Negative | 3329391 - 3329918 | 19403.5 |
| pyrophosphatase | APR48_15655 | Not Available | Positive | 3330182 - 3332686 | 84612.9 |
| transporter | APR48_15660 | Not Available | Positive | 3332860 - 3334299 | 51644.0 |
| hypothetical protein | APR48_15665 | Not Available | Positive | 3334300 - 3335286 | 35486.6 |
| abc transporter | APR48_15670 | Not Available | Positive | 3335290 - 3336474 | 41970.6 |
| abc transporter | APR48_15675 | Not Available | Positive | 3336474 - 3337622 | 41349.1 |
| tetr family transcriptional regulator | APR48_15680 | Not Available | Negative | 3337619 - 3338245 | 22693.1 |
| metal-dependent hydrolase | APR48_15685 | Not Available | Positive | 3338375 - 3339226 | 32512.6 |
| hypothetical protein | APR48_15690 | Not Available | Negative | 3339237 - 3339824 | 21775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
