Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | APR48_15595 | Not Available | Positive | 3320930 - 3321496 | 21469.3 |
| hypothetical protein | APR48_15600 | Not Available | Positive | 3321493 - 3321921 | 14762.5 |
| hypothetical protein | APR48_15605 | Not Available | Positive | 3321986 - 3322870 | 30351.0 |
| hypothetical protein | APR48_15610 | Not Available | Positive | 3322883 - 3323446 | 21367.1 |
| diacylglycerol kinase | APR48_15615 | Not Available | Positive | 3323443 - 3323850 | 14748.2 |
| log family protein | APR48_15620 | Not Available | Positive | 3323882 - 3324472 | 21537.9 |
| transcriptional regulator | APR48_15625 | Not Available | Negative | 3324517 - 3324855 | 12362.0 |
| nad synthetase | APR48_15630 | Not Available | Negative | 3324852 - 3326543 | 60748.8 |
| hypothetical protein | APR48_15635 | Not Available | Positive | 3326524 - 3327729 | 44942.9 |
| hypothetical protein | APR48_15640 | Not Available | Positive | 3327815 - 3328567 | 27369.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
