Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | APR48_15545 | Not Available | Positive | 3308764 - 3309519 | 27624.1 |
| arginyl-trna-protein transferase | APR48_15550 | Not Available | Positive | 3309516 - 3310265 | 28602.2 |
| iclr family transcriptional regulator | APR48_15555 | Not Available | Positive | 3310296 - 3311135 | 30144.2 |
| d-alanyl-d-alanine carboxypeptidase | APR48_15560 | Not Available | Negative | 3311233 - 3312408 | 42002.6 |
| 2-isopropylmalate synthase | APR48_15565 | Not Available | Negative | 3312526 - 3314064 | 55127.3 |
| 2-isopropylmalate synthase | APR48_15570 | Not Available | Negative | 3314115 - 3315821 | 62559.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | APR48_15575 | Not Available | Negative | 3316047 - 3316871 | 30194.8 |
| ketol-acid reductoisomerase | APR48_15580 | Not Available | Negative | 3317053 - 3318069 | 36680.0 |
| acetolactate synthase | APR48_15585 | Not Available | Negative | 3318216 - 3318707 | 18060.0 |
| acetolactate synthase 3 catalytic subunit | APR48_15590 | Not Available | Negative | 3318849 - 3320633 | 65431.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
