Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR48_15495 | Not Available | Positive | 3296709 - 3298658 | 69812.3 |
| hypothetical protein | APR48_15500 | Not Available | Negative | 3298674 - 3299030 | 12529.6 |
| peptidase | APR48_15505 | Not Available | Negative | 3299065 - 3300540 | 51090.1 |
| histidine kinase | APR48_15510 | Not Available | Negative | 3300641 - 3301972 | 47551.7 |
| two-component system response regulator | APR48_15515 | Not Available | Negative | 3301996 - 3302655 | 24539.8 |
| iclr family transcriptional regulator | APR48_15520 | Not Available | Negative | 3302711 - 3303481 | 28034.9 |
| 4-hydroxybenzoate 3-monooxygenase | APR48_15525 | Not Available | Positive | 3303612 - 3304793 | 43663.8 |
| polyketide cyclase | APR48_15530 | Not Available | Negative | 3304763 - 3305191 | 15563.4 |
| transcriptional regulator | APR48_15535 | Not Available | Negative | 3305241 - 3306158 | 32950.1 |
| carbon monoxide dehydrogenase | APR48_15540 | Not Available | Negative | 3306196 - 3308526 | 82031.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
