Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | APR48_00770 | Not Available | Positive | 165592 - 166356 | 26041.3 |
| short-chain dehydrogenase | APR48_00775 | Not Available | Positive | 166367 - 167128 | 26434.8 |
| amidase | APR48_00780 | Not Available | Positive | 167151 - 168527 | 47922.8 |
| abc transporter substrate-binding protein | APR48_00785 | Not Available | Positive | 168563 - 169552 | 34151.4 |
| glutamyl-trna amidotransferase | APR48_00790 | Not Available | Positive | 169569 - 171005 | 50605.3 |
| hypothetical protein | APR48_00795 | Not Available | Positive | 171031 - 171609 | 21697.9 |
| carnitine dehydratase | APR48_00800 | Not Available | Positive | 171740 - 172852 | 39284.1 |
| fatty-acid--coa ligase | APR48_00805 | Not Available | Positive | 172903 - 174462 | 56591.8 |
| acyl-coa dehydrogenase | APR48_00810 | Not Available | Positive | 174511 - 175659 | 41880.1 |
| hypothetical protein | APR48_00815 | Not Available | Positive | 175729 - 176355 | 23517.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
